Please provide an *aligned* fasta file. IMgc will be run as soon as the file is uploaded.
IMgc maximizes the inclusiveness score (I):
which gives the relative importance of retaining segregating sites (S) compared to chromosomal copies (C)
You can set the α value here:
If you use IMgc, please
August E. Woerner
Murray P. Cox
Michael F. Hammer
"Recombination-filtered genomic datasets by information maximization."
23.14 (2007): 1851-1853.
An example input file is found here:
Download fasta file